CDS

Accession Number TCMCG007C17250
gbkey CDS
Protein Id XP_009131352.1
Location 2555102..2556286
Gene LOC103856024
GeneID 103856024
Organism Brassica rapa

Protein

Length 394aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009133104.3
Definition eukaryotic translation initiation factor 6-2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K03264        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000054        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033750        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043023        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071428        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902626        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCACCCGTCTTCAGTTTGAGAACAGCTGCGAAGTTGGCCTCTTTTCAAAACTCACTAATGCCTATTGCTTAGTTGCTGTTGGAGCCTCTGAGAACTTCTATAGTGCCTTTGAGTCAGAGTTAGCTGATGATATCCCTATCGTTAAAACCTCTATTGGAGAAACACGGATCATTGGGCGCCTATGCGTTGGAAACAGGAACGGGCTTCTTGTGCCTCATACAACTACTTACCAAGAGCTTCAACACTTGAGGAACAGTCTACCTGATCAAGTTGTGGTCCAGAGAATCGAGGCGCCTCTGCCTGCTCTTGGAGACTGCATCGTCTGCAACGACCATGTTGCTCTTGCTCACATCGATCTCGACGAGGAGACTGAGGAAATAATATCGGACGTTCTCGGTGTCGAAGTTTTCCGTCAGACGATTGCAGGCAACATTCTTGTAGGCTGTTACTGTGCCTTGTCCAACAGAGGTGGCATCGTCCATGCTTACATCTCGGAGGAAGAGTTGGACGAGCTCTCGGCGCTGCTTCGAGTCCCGCTCGTTGCGGGGACTGTGAACCGTGGTAGTGAAGTTATAGCTGCGGGAATGACCGTCAATGACTGGACTGCTTTCTGTGGCTCAGACACAACTGAAACGGAGCTCTCTGTAATAGACAGTGTCTTCGAGCTAAGTGAATCTTGTGATATAAACAAGATCTCTACATCGGAATGGGATTTGCTTGTGACCAAGTCAGAAGTCCCGGTGTTGGTTATGTTCATACAAGATTGGCGCCCCTCATGTCGATACGTGAGGCATGTAATGGACGAATTCAACTCGAAATACACTGGTCGGTTCAAATTCTACACACTCAACGTTCGTCAAGAGAGAGGCATCGTAATACGCTACGACATATTCAATGTCCCGGCTAGTATTGTCTTCAAAGGCGGAGACGAGATGGCTAGAGTAAATGGATTCCATCTTTATGAATTAGAAAGACTAGTGAAGCAGTACGATGACTTGGTCTATGCATCCAAGCTTAAGGATAACTTAGCAAAAGAAAATAATTTGCTAATCAAGACAACAAATCACCATAAAATCAAAGGAGAACTGATAAATTTATTTGCATATGTAGGCATGTGTGTTTTGGTATTCAGCTCTGTTCTTTACTTTTCTTTTCTTTTTGTTCTTGGATACTTTGAGTAA
Protein:  
MATRLQFENSCEVGLFSKLTNAYCLVAVGASENFYSAFESELADDIPIVKTSIGETRIIGRLCVGNRNGLLVPHTTTYQELQHLRNSLPDQVVVQRIEAPLPALGDCIVCNDHVALAHIDLDEETEEIISDVLGVEVFRQTIAGNILVGCYCALSNRGGIVHAYISEEELDELSALLRVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTETELSVIDSVFELSESCDINKISTSEWDLLVTKSEVPVLVMFIQDWRPSCRYVRHVMDEFNSKYTGRFKFYTLNVRQERGIVIRYDIFNVPASIVFKGGDEMARVNGFHLYELERLVKQYDDLVYASKLKDNLAKENNLLIKTTNHHKIKGELINLFAYVGMCVLVFSSVLYFSFLFVLGYFE